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| Player | Team | Goals |
|---|---|---|
| J. Tesar | Sparta Praha U19 | 15 |
| L. Branecky | Zlín U19 | 15 |
| D. Pandula | Pardubice U19 | 13 |
| D. S. Guimaraes | Karviná U19 | 13 |
| V. Hora | České Budějovice U19 | 13 |
| A. Proniuk | Sigma Olomouc U19 | 11 |
| J. Tredl | Jindřichův Hradec | 11 |
| P. Hasek | Viktoria Plzeň U19 | 11 |
| T. Kopr | Zbrojovka Brno U19 | 11 |
| B. Ogungbayi | Jindřichův Hradec | 10 |
| M. Mikulenka | Sigma Olomouc U19 | 10 |
| A. Broz | Pardubice U19 | 9 |
| M. Frolek | Baník Ostrava U19 | 9 |
| T. Sloncik | Zlín U19 | 9 |
| A. Nguyen | Sigma Olomouc U19 | 8 |
| D. Hajek | Jindřichův Hradec | 8 |
| D. Pavlik | Zbrojovka Brno U19 | 8 |
| D. Rus | Sparta Praha U19 | 8 |
| L. Ezeh | Karviná U19 | 8 |
| S. Studeny | Sigma Olomouc U19 | 8 |
| D. Howard | Mladá Boleslav U19 | 7 |
| F. Kluska | Zbrojovka Brno U19 | 7 |
| P. Kacor | Karviná U19 | 7 |
| H. Hruska | Sparta Praha U19 | 6 |
| Kahuan Vinicius | Karviná U19 | 6 |
| M. Cerny | Zbrojovka Brno U19 | 6 |
| M. Kostka | Slovácko U19 | 6 |
| M. Malek | Baník Ostrava U19 | 6 |
| O. Dohnal | České Budějovice U19 | 6 |
| P. Zika | České Budějovice U19 | 6 |