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| Player | Team | Goals |
|---|---|---|
| T. Pope | Port Vale | 31 |
| N. Wells | Bradford | 22 |
| J. Cureton | Exeter City | 21 |
| D. Nardiello | Rotherham | 18 |
| A. Akinfenwa | Northampton | 16 |
| J. Maghoma | Burton Albion | 16 |
| R. Howe | Torquay | 16 |
| B. Assombalonga | Southend | 15 |
| R. Grant | Rochdale | 15 |
| D. Kedwell | Gillingham | 14 |
| J. Hyde | Barnet | 14 |
| J. Redshaw | Morecambe | 14 |
| B. Kee | Burton Albion | 13 |
| C. Zola | Burton Albion | 13 |
| G. Tomlin | Southend | 13 |
| D. Burton | Gillingham | 12 |
| J. Hanson | Bradford | 12 |
| J. Midson | AFC Wimbledon | 12 |
| M. Richards | Chesterfield | 12 |
| K. Ellison | Morecambe | 11 |
| M. McClure | Wycombe | 11 |
| A. Chambers | York | 10 |
| A. Grimes | Rochdale | 10 |
| A. Potter | Oxford United | 10 |
| C. Reid | Aldershot Town | 10 |
| J. Brown | Fleetwood Town | 10 |
| J. Grant | Wycombe | 10 |
| J. O'Flynn | Exeter City | 10 |
| J. Parkin | Fleetwood Town | 10 |
| L. Hughes | Port Vale | 10 |