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| Player | Team | Goals |
|---|---|---|
| S. Winnall | Scunthorpe | 23 |
| R. Reid | Plymouth | 17 |
| S. Hogan | Rochdale | 17 |
| A. Sarcevic | Fleetwood Town | 14 |
| B. Harrison | Cheltenham | 13 |
| J. O'Toole | Bristol Rovers | 13 |
| L. James | Hartlepool | 13 |
| R. Murphy | Dagenham & Redbridge | 13 |
| B. Corr | Southend | 12 |
| B. Kee | Burton Albion | 12 |
| C. Zebroski | Newport County | 12 |
| A. McGurk | Burton Albion | 11 |
| D. Nardiello | Bury | 11 |
| E. Doyle | Chesterfield | 11 |
| G. Roberts | Chesterfield | 11 |
| I. Henderson | Rochdale | 11 |
| J. Cureton | Cheltenham | 11 |
| K. Hurst | Southend | 11 |
| P. Amond | Morecambe | 11 |
| D. Syers | Scunthorpe | 10 |
| J. Constable | Oxford United | 10 |
| K. Ellison | Morecambe | 10 |
| K. Naismith | Accrington ST | 10 |
| W. Fletcher | York | 10 |
| J. O'Shea | Chesterfield | 9 |
| M. Smith | AFC Wimbledon | 9 |
| P. Murphy | Accrington ST | 9 |
| A. Ogogo | Dagenham & Redbridge | 8 |
| C. Hourihane | Plymouth | 8 |
| D. Ball | Fleetwood Town | 8 |