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| Player | Team | Goals |
|---|---|---|
| A. Heinz | Bayern München II | 21 |
| J. Nischalke | Würzburger Kickers | 15 |
| L. Akhalaia | Greuther Fürth II | 15 |
| S. Sturm | Aubstadt | 15 |
| T. Bonga | Würzburger Kickers | 15 |
| S. Skarlatidis | SpVgg Unterhaching | 14 |
| M. Cocic | Illertissen | 13 |
| T. Stossberger | Buchbach | 13 |
| Y. Glessing | Illertissen | 13 |
| D. Gunes | Memmingen | 12 |
| C. Pfeiffer | SpVgg Unterhaching | 11 |
| L. Schraufstetter | Eichstätt | 11 |
| P. Scobel | Nürnberg II | 11 |
| A. Keereerom | Schwaben Augsburg | 10 |
| F. Bachschmid | Wacker Burghausen | 10 |
| P. Schittler | Eichstätt | 10 |
| S. Bahar | Buchbach | 10 |
| B. Baier | Viktoria Aschaffenburg | 9 |
| E. Weeger | Ansbach | 9 |
| J. Aigboje | SpVgg Unterhaching | 9 |
| A. Junger | Vilzing | 8 |
| D. Gerstmayer | Illertissen | 8 |
| D. Nuhanovic | Ansbach | 8 |
| J. Skowronek | Nürnberg II | 8 |
| M. Grimm | Aubstadt | 8 |
| N. Seefried | Ansbach | 8 |
| T. Kusanovic | Nürnberg II | 8 |
| D. Berisha | Würzburger Kickers | 7 |
| F. Lutz | Memmingen | 7 |
| J. Krupa | SpVgg Unterhaching | 7 |