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| Player | Team | Goals |
|---|---|---|
| D. Ziane | Lokomotive Leipzig | 18 |
| C. Beck | BFC Dynamo | 16 |
| T. Ciğerci | Altglienicke | 14 |
| A. Mergel | FC Rot-Weiß Erfurt | 13 |
| D. Frahn | SV Babelsberg 03 | 12 |
| K. Seidemann | FC Rot-Weiß Erfurt | 12 |
| N. Wähling | Energie Cottbus | 12 |
| O. Atilgan | Lokomotive Leipzig | 12 |
| S. Pfeffer | Lokomotive Leipzig | 12 |
| C. Flath | Luckenwalde | 11 |
| F. Brügmann | Chemnitzer FC | 11 |
| P. Breitkreuz | Altglienicke | 11 |
| S. Benyamina | Greifswalder FC | 11 |
| T. Uzan | Altglienicke | 11 |
| C. Theisen | Viktoria Berlin | 10 |
| E. Hottmann | Energie Cottbus | 10 |
| P. Sussek | BAK '07 | 10 |
| P. Verkamp | FC Carl Zeiss Jena | 10 |
| A. Trübenbach | ZFC Meuselwitz | 9 |
| Mustafa Abdullatif | Hertha BSC II | 9 |
| A. Suljić | BFC Dynamo | 8 |
| C. Euschen | BFC Dynamo | 8 |
| D. Scherhant | Hertha BSC II | 8 |
| E. Aksakal | Hertha BSC II | 8 |
| F. Kirstein | BSG Chemie Leipzig | 8 |
| J. Muiomo | FC Carl Zeiss Jena | 8 |
| L. Lämmel | FC Carl Zeiss Jena | 8 |
| M. Eshele | BSG Chemie Leipzig | 8 |
| M. Steinborn | SV Babelsberg 03 | 8 |
| P. Harres | Viktoria Berlin | 8 |