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| Player | Team | Goals |
|---|---|---|
| Y. Ōkubo | Kawasaki Frontale | 18 |
| Y. Toyoda | Sagan Tosu | 15 |
| Marquinhos | Vissel Kobe | 14 |
| Pedro Junior | Vissel Kobe | 13 |
| Y. Muto | FC Tokyo | 13 |
| K. Nagai | Nagoya Grampus | 12 |
| M. Novakovič | Shimizu S-pulse | 12 |
| S. Koroki | Urawa | 12 |
| Y. Kobayashi | Kawasaki Frontale | 12 |
| Edu | FC Tokyo | 11 |
| H. Satō | Sanfrecce Hiroshima | 11 |
| Leandro | Kashiwa Reysol | 11 |
| Davi | Kashima | 10 |
| N. Ishihara | Sanfrecce Hiroshima | 10 |
| T. Usami | Gamba Osaka | 10 |
| Y. Endo | Kashima | 10 |
| D. Mrđa | Omiya Ardija | 9 |
| Patric | Gamba Osaka | 9 |
| S. Akamine | Vegalta Sendai | 9 |
| Caio | Kashima | 8 |
| S. Doi | Kashima | 8 |
| S. Ito | Yokohama F. Marinos | 8 |
| D. Forlán | Cerezo Osaka | 7 |
| H. Abe | Gamba Osaka | 7 |
| H. Takasaki | Tokushima Vortis | 7 |
| M. Kudo | Kashiwa Reysol | 7 |
| M. Tanaka | Nagoya Grampus | 7 |
| Z. Ljubijankič | Omiya Ardija | 7 |
| A. Ienaga | Omiya Ardija | 6 |
| G. Omae | Shimizu S-pulse | 6 |