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| Player | Team | Goals |
|---|---|---|
| Leonardo | Gainare Tottori | 24 |
| João Gabriel | Sagamihara | 17 |
| K. Nakagawa | FC Ryukyu | 16 |
| Y. Togashi | FC Ryukyu | 16 |
| K. Taniguchi | Grulla Morioka | 15 |
| R. Yonezawa | Cerezo Osaka U23 | 12 |
| K. Oshima | Thespakusatsu Gunma | 10 |
| Y. Tomidokoro | FC Ryukyu | 10 |
| Fernandinho | Gainare Tottori | 9 |
| K. Yajima | Tokyo U23 | 9 |
| H. Take | Fukushima United | 8 |
| J. Hata | Azul Claro Numazu | 8 |
| K. Ichimi | Gamba Osaka U23 | 8 |
| J. Kato | Gainare Tottori | 7 |
| K. Kazama | Thespakusatsu Gunma | 7 |
| K. Kitawaki | YSCC | 7 |
| M. Nakajima | Cerezo Osaka U23 | 7 |
| N. Misawa | YSCC | 7 |
| R. Wada | FC Ryukyu | 7 |
| S. Aoki | Azul Claro Numazu | 7 |
| S. Takahashi | Thespakusatsu Gunma | 7 |
| T. Hiraoka | Tokyo U23 | 7 |
| T. Yazawa | Sagamihara | 7 |
| Vitor Gabriel | Gainare Tottori | 7 |
| Y. Edamoto | FC Ryukyu | 7 |
| Y. Maejima | Kataller Toyama | 7 |
| H. Higuchi | Fukushima United | 6 |
| K. Hisatomi | Blaublitz Akita | 6 |
| K. Tanoguchi | Fujieda MYFC | 6 |
| M. Tsuji | YSCC | 6 |