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| Player | Team | Goals |
|---|---|---|
| J. Kadák | AS Trencin | 13 |
| P. Azango | AS Trencin | 11 |
| M. Regáli | Ružomberok | 10 |
| N. Krstović | Dunajska Streda | 9 |
| E. Henty | Slovan Bratislava | 9 |
| J. Zmrhal | Slovan Bratislava | 8 |
| M. Lačný | Pohronie | 8 |
| M. Ristovski | Spartak Trnava | 8 |
| T. Ďubek | Zlaté Moravce | 7 |
| N. Kupusović | AS Trencin | 7 |
| D. Andrič | Liptovský Mikuláš | 7 |
| M. Boďa | Ružomberok | 7 |
| V. Weiss | Slovan Bratislava | 7 |
| E. Sukisa | Senica | 7 |
| S. Mráz | Slovan Bratislava | 7 |
| V. Bichakhchyan | Žilina | 6 |
| M. Kochan | Ružomberok | 6 |
| R. Bartoš | Liptovský Mikuláš | 6 |
| A. Kyziridis | Zlaté Moravce | 6 |
| M. Trusa | Zemplín Michalovce | 6 |
| A. Green | Slovan Bratislava | 5 |
| R. Jureskin | Sereď | 5 |
| D. Ďuriš | Žilina | 5 |
| Ľ. Laura | Liptovský Mikuláš | 5 |
| T. Staš | Liptovský Mikuláš | 5 |
| T. Bobček | Ružomberok | 5 |
| M. Jurdík | Senica | 5 |
| Saymon Cabral | Spartak Trnava | 5 |
| D. Radić | Sereď | 5 |
| M. Marcin | Zemplín Michalovce | 5 |