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| Player | Team | Goals |
|---|---|---|
| T. Chory | Slavia Praha | 17 |
| L. Haraslin | Sparta Praha | 13 |
| M. Chytil | Slavia Praha | 13 |
| V. Patrak | Pardubice | 13 |
| J. Kuchta | Sparta Praha | 11 |
| V. Darida | Hradec Králové | 11 |
| A. Rrahmani | Sparta Praha | 11 |
| J. Chramosta | FK Jablonec | 10 |
| O. Mihalik | Hradec Králové | 10 |
| L. Jawo | FK Jablonec | 9 |
| M. Sevcik | Mlada Boleslav | 9 |
| D. Vasulin | Sigma Olomouc | 9 |
| M. Bilek | Teplice | 9 |
| R. Krollis | Slovan Liberec | 8 |
| D. Visinsky | Plzen | 8 |
| L. Provod | Slavia Praha | 7 |
| A. Tanko | Pardubice | 7 |
| J. Mercado | Sparta Praha | 7 |
| M. Vydra | Plzen | 7 |
| E. Mahmic | Slovan Liberec | 7 |
| M. Cupak | Zlin | 7 |
| M. Vojta | Mlada Boleslav | 7 |
| S. Chaloupek | Slavia Praha | 7 |
| T. Poznar | Zlin | 7 |
| P. Adu | Plzen | 7 |
| L. Masek | Slovan Liberec | 7 |
| R. Durosinmi | Plzen | 7 |
| E. Ayaosi | Karviná | 6 |
| A. Gning | Karviná | 6 |
| D. Krcik | Karviná | 6 |