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| # | Team | P | W | D | L | Goals | Pts |
|---|---|---|---|---|---|---|---|
| 1 | Bayern München II | 38 | 19 | 8 | 11 | 76:60 | 65 |
| 2 | Würzburger Kickers | 38 | 19 | 7 | 12 | 71:60 | 64 |
| 3 | Eintracht Braunschweig | 38 | 18 | 10 | 10 | 64:53 | 64 |
| 4 | FC Ingolstadt 04 | 38 | 17 | 12 | 9 | 61:40 | 63 |
| 5 | MSV Duisburg | 38 | 17 | 11 | 10 | 68:48 | 62 |
| 6 | Hansa Rostock | 38 | 17 | 8 | 13 | 54:43 | 59 |
| 7 | SV Meppen | 38 | 16 | 10 | 12 | 69:57 | 58 |
| 8 | TSV 1860 München | 38 | 16 | 10 | 12 | 63:54 | 58 |
| 9 | Waldhof Mannheim | 38 | 13 | 17 | 8 | 52:47 | 56 |
| 10 | 1. FC Kaiserslautern | 38 | 14 | 13 | 11 | 59:54 | 55 |
| 11 | SpVgg Unterhaching | 38 | 12 | 15 | 11 | 50:53 | 51 |
| 12 | FC Viktoria Köln | 38 | 14 | 9 | 15 | 65:71 | 51 |
| 13 | KFC Uerdingen 05 | 38 | 12 | 12 | 14 | 40:54 | 48 |
| 14 | 1. FC Magdeburg | 38 | 10 | 17 | 11 | 49:42 | 47 |
| 15 | Hallescher FC | 38 | 12 | 10 | 16 | 64:66 | 46 |
| 16 | FSV Zwickau | 38 | 11 | 11 | 16 | 56:61 | 44 |
| 17 | Chemnitzer FC | 38 | 11 | 11 | 16 | 54:60 | 44 |
| 18 | Preußen Münster | 38 | 9 | 13 | 16 | 49:62 | 40 |
| 19 | SG Sonnenhof Grossaspach | 38 | 8 | 8 | 22 | 33:67 | 32 |
| 20 | FC Carl Zeiss Jena | 38 | 5 | 8 | 25 | 40:85 | 23 |